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1 vote
1 answer
64 views

Lower case vs. upper case nucleotids in sequence vs. dots at the end

2 votes
1 answer
88 views

calculate mismatch frequency/rate from a BAM file

3 votes
6 answers
673 views

Separate multiple sequence into different file, one sequence per file

1 vote
1 answer
43 views

What are the output files of RNA-Seq from facility?

3 votes
0 answers
25 views

Issue creating CNV plot from WES data

5 votes
2 answers
161 views

Perfect Phylogeny vs Maximum parsimony

2 votes
1 answer
203 views

How can I generate ASV file from nanopore sequencing data?

0 votes
1 answer
17 views

Invalid tag name: "1KG" and Invalid character '/' in 'SA' FORMAT field at chr1:6197766

8 votes
4 answers
10k views

What reasons are there to choose Illumina if PacBio provides longer and better reads?

0 votes
1 answer
61 views

How do I build the MinusB database for Kraken2? (Taxonomy issues)

1 vote
1 answer
69 views

Choosing the best number of species for assay

2 votes
1 answer
90 views

Is it common to get different number of SNVs+Indels across samples from vcf files generated using GATK and DRAGEN (counts are higher for GATK)?

0 votes
1 answer
408 views

Fastqc- Per Base Sequence Quality

0 votes
0 answers
20 views

What statistical analysis should I perform on DNA variants from unequal number of case (34) and control (11) samples?

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