Bioinformatics Stack Exchange is a question and answer site for researchers, developers, students, teachers, and end users interested in bioinformatics. It only takes a minute to sign up.

Sign up to join this community
Anybody can ask a question
Anybody can answer
The best answers are voted up and rise to the top
Bioinformatics

Explore our questions

Ask Question
more tags
Active Hot Week Month
2 votes
2 answers
2k views

Adding metadata to Seurat object

gringer's user avatar
gringer♦
  • 13.5k
1 vote
1 answer
6k views

Seurat VlnPlot presenting expression of multiple genes in a single cluster

user438383's user avatar
user438383
  • 1,621
2 votes
1 answer
415 views

What column and row naming requirements exist with Seurat (context: when loading SPLiT-Seq data)

Community's user avatar
CommunityBot
  • 1
2 votes
1 answer
1k views

Featureplot by co-expression of some genes

Community's user avatar
CommunityBot
  • 1
1 vote
0 answers
28 views

Parsing gene names to detect organism from h5ad input

kcm's user avatar
kcm
  • 1,754
-1 votes
1 answer
74 views

Gviz Coverage Plots

Community's user avatar
CommunityBot
  • 1
0 votes
1 answer
17 views

Looking for datasets of RNA-Seq (or scRNA-Seq) for L1 larvae C. elegans

Community's user avatar
CommunityBot
  • 1
1 vote
2 answers
571 views

Assigning subcluster idents to original object

Community's user avatar
CommunityBot
  • 1
0 votes
1 answer
38 views

is it possible to count cell in Violin plot in seurat?

haci's user avatar
haci
  • 3,892
1 vote
1 answer
191 views

How do cellranger and cellbender call cells? What is the difference between them?

Community's user avatar
CommunityBot
  • 1
0 votes
3 answers
88 views

How to handle technical replicates in cellranger count?

swbarnes2's user avatar
swbarnes2
  • 1,882
1 vote
2 answers
118 views

h5ad file format filter

Chris_Rands's user avatar
Chris_Rands
  • 3,928
2 votes
1 answer
79 views

Mapping single cell data with annotation

Chris_Rands's user avatar
Chris_Rands
  • 3,928
1 vote
1 answer
195 views

Low fraction reads in cell metric in snRNA-seq data

Chris_Rands's user avatar
Chris_Rands
  • 3,928
Browse more Questions

Your privacy

By clicking “Accept all cookies”, you agree Stack Exchange can store cookies on your device and disclose information in accordance with our Cookie Policy.