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edit approved Nov 1, 2019 at 16:51
Glorfindel
edit approved Nov 1, 2019 at 16:51
Glorfindel
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What aredo these files / annotations mean?

I have no experience in Bioinformatics and I need to understand what the annotations given here mean (I am including the first few lines, please see the link for more):

contig_id                         feature_id              type       location                                 start   stop    strand
gi|1045318032|gb|MAZB01000333.1|  fig|252393.25.peg.1     peg        gi|1045318032|gb|MAZB01000333.1|_511_2   511     2       -
gi|1045318033|gb|MAZB01000332.1|  fig|252393.25.repeat.1  repeat     gi|1045318033|gb|MAZB01000332.1|_1_128   1       128     +
gi|1045318033|gb|MAZB01000332.1|  fig|252393.25.repeat.2  repeat     gi|1045318033|gb|MAZB01000332.1|_318_532 318     532     +
gi|1045318033|gb|MAZB01000332.1|  fig|252393.25.peg.2     peg        gi|1045318033|gb|MAZB01000332.1|_530_321 530     321     -
gi|1045318034|gb|MAZB01000331.1|  fig|252393.25.repeat.3  repeat     gi|1045318034|gb|MAZB01000331.1|_1_534   1       534     +
gi|1045318034|gb|MAZB01000331.1|  fig|252393.25.peg.3     peg        gi|1045318034|gb|MAZB01000331.1|_3_410   3       410     +
gi|1045318035|gb|MAZB01000330.1|  fig|252393.25.repeat.4  repeat     gi|1045318035|gb|MAZB01000330.1|_1_128   1       128     +
gi|1045318035|gb|MAZB01000330.1|  fig|252393.25.peg.4     peg        gi|1045318035|gb|MAZB01000330.1|_3_539   3       539     +
gi|1045318035|gb|MAZB01000330.1|  fig|252393.25.repeat.5  repeat     gi|1045318035|gb|MAZB01000330.1|_413_539 413     539     +

Could someone help me to understand what thesethese files/each and all annotations mean?

What are these files / annotations mean?

I have no experience in Bioinformatics and I need to understand what the annotations given here mean (I am including the first few lines, please see the link for more):

contig_id                         feature_id              type       location                                 start   stop    strand
gi|1045318032|gb|MAZB01000333.1|  fig|252393.25.peg.1     peg        gi|1045318032|gb|MAZB01000333.1|_511_2   511     2       -
gi|1045318033|gb|MAZB01000332.1|  fig|252393.25.repeat.1  repeat     gi|1045318033|gb|MAZB01000332.1|_1_128   1       128     +
gi|1045318033|gb|MAZB01000332.1|  fig|252393.25.repeat.2  repeat     gi|1045318033|gb|MAZB01000332.1|_318_532 318     532     +
gi|1045318033|gb|MAZB01000332.1|  fig|252393.25.peg.2     peg        gi|1045318033|gb|MAZB01000332.1|_530_321 530     321     -
gi|1045318034|gb|MAZB01000331.1|  fig|252393.25.repeat.3  repeat     gi|1045318034|gb|MAZB01000331.1|_1_534   1       534     +
gi|1045318034|gb|MAZB01000331.1|  fig|252393.25.peg.3     peg        gi|1045318034|gb|MAZB01000331.1|_3_410   3       410     +
gi|1045318035|gb|MAZB01000330.1|  fig|252393.25.repeat.4  repeat     gi|1045318035|gb|MAZB01000330.1|_1_128   1       128     +
gi|1045318035|gb|MAZB01000330.1|  fig|252393.25.peg.4     peg        gi|1045318035|gb|MAZB01000330.1|_3_539   3       539     +
gi|1045318035|gb|MAZB01000330.1|  fig|252393.25.repeat.5  repeat     gi|1045318035|gb|MAZB01000330.1|_413_539 413     539     +

Could someone help me to understand what these files/each annotations mean?

What do these files / annotations mean?

I have no experience in Bioinformatics and I need to understand what the annotations given here mean (I am including the first few lines, please see the link for more):

contig_id                         feature_id              type       location                                 start   stop    strand
gi|1045318032|gb|MAZB01000333.1|  fig|252393.25.peg.1     peg        gi|1045318032|gb|MAZB01000333.1|_511_2   511     2       -
gi|1045318033|gb|MAZB01000332.1|  fig|252393.25.repeat.1  repeat     gi|1045318033|gb|MAZB01000332.1|_1_128   1       128     +
gi|1045318033|gb|MAZB01000332.1|  fig|252393.25.repeat.2  repeat     gi|1045318033|gb|MAZB01000332.1|_318_532 318     532     +
gi|1045318033|gb|MAZB01000332.1|  fig|252393.25.peg.2     peg        gi|1045318033|gb|MAZB01000332.1|_530_321 530     321     -
gi|1045318034|gb|MAZB01000331.1|  fig|252393.25.repeat.3  repeat     gi|1045318034|gb|MAZB01000331.1|_1_534   1       534     +
gi|1045318034|gb|MAZB01000331.1|  fig|252393.25.peg.3     peg        gi|1045318034|gb|MAZB01000331.1|_3_410   3       410     +
gi|1045318035|gb|MAZB01000330.1|  fig|252393.25.repeat.4  repeat     gi|1045318035|gb|MAZB01000330.1|_1_128   1       128     +
gi|1045318035|gb|MAZB01000330.1|  fig|252393.25.peg.4     peg        gi|1045318035|gb|MAZB01000330.1|_3_539   3       539     +
gi|1045318035|gb|MAZB01000330.1|  fig|252393.25.repeat.5  repeat     gi|1045318035|gb|MAZB01000330.1|_413_539 413     539     +

Could someone help me to understand what these files and all annotations mean?

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terdon ♦
terdon ♦
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I have no experience in Bioinformatics.

Could someone help me and I need to understand what do these files/eachthe annotations given here mean? (I am including the first few lines, please see the link for more):

fig|6666666contig_id                         feature_id              type       location                                 start   stop    strand
gi|1045318032|gb|MAZB01000333.3257811|  fig|252393.25.peg.1     peg        gi|1045318032|gb|MAZB01000333.1|_511_2   511     2       -
fig|6666666gi|1045318033|gb|MAZB01000332.3257811|  fig|252393.peg25.2repeat.1  repeat     gi|1045318033|gb|MAZB01000332.1|_1_128   1       128     +
gi|1045318033|gb|MAZB01000332.1|  fig|252393.25.repeat.2  repeat     gi|1045318033|gb|MAZB01000332.1|_318_532 318     532     +
gi|1045318033|gb|MAZB01000332.1|  fig|252393.25.peg.12     peg        gi|1045318033|gb|MAZB01000332.1|_530_321 530     321     -
gi|1045318034|gb|MAZB01000331.1|  fig|252393.25.repeat.3  repeat     gi|1045318034|gb|MAZB01000331.1|_1_534   1
        534     +
gi|1045318032|gb|MAZB01000333gi|1045318034|gb|MAZB01000331.1|  fig|252393.25.peg.3     peg        gi|1045318034|gb|MAZB01000331.1|_3_410   3       410     +
gi|1045318033|gb|MAZB01000332gi|1045318035|gb|MAZB01000330.1|
   fig|252393.25.repeat.4  repeat     gi|1045318035|gb|MAZB01000330.1|_1_128   1       128     +
gi|1045318032|gb|MAZB01000333gi|1045318035|gb|MAZB01000330.1|_511_21|  fig|252393.25.peg.4     peg        gi|1045318035|gb|MAZB01000330.1|_3_539   3       539     +
gi|1045318033|gb|MAZB01000332gi|1045318035|gb|MAZB01000330.1|_1_1281|  fig|252393.25.repeat.5  repeat     gi|1045318035|gb|MAZB01000330.1|_413_539 413     539     +

Could someone help me to understand what these files/each annotations mean?

I have no experience in Bioinformatics.

Could someone help me to understand what do these files/each annotations mean?

fig|6666666.325781.peg.1 
fig|6666666.325781.peg.2

fig|252393.25.peg.1 
fig|252393.25.repeat.1
 
gi|1045318032|gb|MAZB01000333.1| 
gi|1045318033|gb|MAZB01000332.1|
 
gi|1045318032|gb|MAZB01000333.1|_511_2 
gi|1045318033|gb|MAZB01000332.1|_1_128

I have no experience in Bioinformatics and I need to understand what the annotations given here mean (I am including the first few lines, please see the link for more):

contig_id                         feature_id              type       location                                 start   stop    strand
gi|1045318032|gb|MAZB01000333.1|  fig|252393.25.peg.1     peg        gi|1045318032|gb|MAZB01000333.1|_511_2   511     2       -
gi|1045318033|gb|MAZB01000332.1|  fig|252393.25.repeat.1  repeat     gi|1045318033|gb|MAZB01000332.1|_1_128   1       128     +
gi|1045318033|gb|MAZB01000332.1|  fig|252393.25.repeat.2  repeat     gi|1045318033|gb|MAZB01000332.1|_318_532 318     532     +
gi|1045318033|gb|MAZB01000332.1|  fig|252393.25.peg.2     peg        gi|1045318033|gb|MAZB01000332.1|_530_321 530     321     -
gi|1045318034|gb|MAZB01000331.1|  fig|252393.25.repeat.3  repeat     gi|1045318034|gb|MAZB01000331.1|_1_534   1       534     +
gi|1045318034|gb|MAZB01000331.1|  fig|252393.25.peg.3     peg        gi|1045318034|gb|MAZB01000331.1|_3_410   3       410     +
gi|1045318035|gb|MAZB01000330.1|  fig|252393.25.repeat.4  repeat     gi|1045318035|gb|MAZB01000330.1|_1_128   1       128     +
gi|1045318035|gb|MAZB01000330.1|  fig|252393.25.peg.4     peg        gi|1045318035|gb|MAZB01000330.1|_3_539   3       539     +
gi|1045318035|gb|MAZB01000330.1|  fig|252393.25.repeat.5  repeat     gi|1045318035|gb|MAZB01000330.1|_413_539 413     539     +

Could someone help me to understand what these files/each annotations mean?

removed unnecessary images of text
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terdon ♦
terdon ♦
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I have no experience in Bioinformatics.

Could someone help me to understand what do these files/each anootations meaningannotations mean?

enter image description here

fig|6666666.325781.peg.1

fig|6666666.325781.peg.2

enter image description here

fig|252393.25.peg.1

fig|252393.25.repeat.1

enter image description here

gi|1045318032|gb|MAZB01000333.1|

gi|1045318033|gb|MAZB01000332.1|

enter image description here

gi|1045318032|gb|MAZB01000333.1|_511_2

gi|1045318033|gb|MAZB01000332.1|_1_128

fig|6666666.325781.peg.1 
fig|6666666.325781.peg.2

fig|252393.25.peg.1 
fig|252393.25.repeat.1

gi|1045318032|gb|MAZB01000333.1| 
gi|1045318033|gb|MAZB01000332.1|

gi|1045318032|gb|MAZB01000333.1|_511_2 
gi|1045318033|gb|MAZB01000332.1|_1_128

I have no experience in Bioinformatics.

Could someone help me to understand what do these files/each anootations meaning?

enter image description here

fig|6666666.325781.peg.1

fig|6666666.325781.peg.2

enter image description here

fig|252393.25.peg.1

fig|252393.25.repeat.1

enter image description here

gi|1045318032|gb|MAZB01000333.1|

gi|1045318033|gb|MAZB01000332.1|

enter image description here

gi|1045318032|gb|MAZB01000333.1|_511_2

gi|1045318033|gb|MAZB01000332.1|_1_128

I have no experience in Bioinformatics.

Could someone help me to understand what do these files/each annotations mean?

fig|6666666.325781.peg.1 
fig|6666666.325781.peg.2

fig|252393.25.peg.1 
fig|252393.25.repeat.1

gi|1045318032|gb|MAZB01000333.1| 
gi|1045318033|gb|MAZB01000332.1|

gi|1045318032|gb|MAZB01000333.1|_511_2 
gi|1045318033|gb|MAZB01000332.1|_1_128
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