Timeline for How to seperate the genus into different group based on th ANI calculation?
Current License: CC BY-SA 4.0
12 events
| when toggle format | what | by | license | comment | |
|---|---|---|---|---|---|
| Mar 11, 2020 at 14:18 | comment | added | TANGLi83 | okkk, it'll be fine, i'll memorize the words(or recite words) | |
| Mar 11, 2020 at 14:14 | comment | added | M__♦ | Just a minute I'm in a meeting | |
| Mar 11, 2020 at 14:11 | comment | added | TANGLi83 | Yes, I'll be around at the same time tomorrow, it's ok. | |
| Mar 11, 2020 at 13:33 | comment | added | M__♦ | Hi @Tangli83 really sorry I was late, if you are around the same time tomorrow please let me know | |
| Mar 8, 2020 at 14:25 | comment | added | TANGLi83 | ??? Where is the invitation? Should I check my Gmail message box? I can't see it in stack exchange's message box | |
| Mar 8, 2020 at 14:22 | comment | added | TANGLi83 | Thank you!!! You are so nice !!! | |
| Mar 8, 2020 at 14:19 | comment | added | TANGLi83 | Sorry, but where is the phylogenetics debugging forum? ... I come from a web restricted area, have little knowledge about the foreign web... CRY | |
| Mar 8, 2020 at 14:11 | comment | added | M__♦ | Okay, first up I don't use R, I use Python instead, the only thing I'll use R for is ggplot2. I've never worked on Strep. What we should do is arrange a time to chat on the phylogenetics debugging forum | |
| Mar 8, 2020 at 14:08 | comment | added | TANGLi83 | But isn't the result of ANI is an NxN matrix? How to translate it into a 2x2 matrix? I used the dcast() funtion in R to transform the data, from A to B. A: Streptomyces_zinciresistens.fna Streptomyces_aidingensis.fna 78.6608 909 2493 Streptomyces_zinciresistens.fna Streptomyces_gilvigriseus.fna 78.4136 719 2493 ... B: Kitasatospora.papulosa Streptomyces.achromogenes Streptomyces.adustus Kitasatospora papulosa 100.0000 81.0354 81.1125 | |
| Mar 8, 2020 at 14:03 | comment | added | TANGLi83 | Thanks~ Wish you have a good day (or night???) : ) | |
| Mar 8, 2020 at 14:02 | vote | accept | TANGLi83 | ||
| Mar 8, 2020 at 13:27 | history | answered | M__♦ | CC BY-SA 4.0 |