Timeline for Metagenomics pipeline recommendations for short-read data
Current License: CC BY-SA 4.0
4 events
| when toggle format | what | by | license | comment | |
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| Mar 10, 2022 at 2:17 | comment | added | juanjo75es | Great. Indeed with the last version t actually gets better results than what it's reported in the document and does not require Flye even for larger viruses. If you want to test it at some point, let me know and I will provide some advice and the last version. | |
| Mar 9, 2022 at 21:07 | comment | added | M__♦ | Many thanks @juanjo75es. The key take home message thus far is the consistency of the benchmarks used and s-align does resonate strongly on this index. I'm considering this from a conservative point of view. The variable performance of Spade/MetaSpades is weird (everyone is aware of Spades). Run time is not the issue as you've pointed out. I've some reading to do. | |
| Mar 9, 2022 at 21:01 | vote | accept | M__♦ | ||
| Mar 9, 2022 at 19:39 | history | answered | juanjo75es | CC BY-SA 4.0 |