Timeline for Extract specific nucleotide base position for query and subject from text file
Current License: CC BY-SA 4.0
11 events
| when toggle format | what | by | license | comment | |
|---|---|---|---|---|---|
| Mar 27, 2023 at 22:28 | answer | added | jared_mamrot | timeline score: 2 | |
| Mar 24, 2023 at 13:57 | review | Close votes | |||
| Mar 28, 2023 at 20:55 | |||||
| Mar 24, 2023 at 12:56 | comment | added | terdon♦ | And why aren't your numbers in sequence? Why do we go from 180 as the last position of the first line to 241 as the first position of the second? Why isn't that 181? Is that actually what your data look like? | |
| Mar 24, 2023 at 12:33 | comment | added | terdon♦ | Will you always have just one alignment in your file or can you have muiltiple? Does our solution need to deal with both cases? | |
| Mar 23, 2023 at 19:48 | comment | added | gringer♦ | FYI, the BLAST text format output is for reading, not parsing with a computer program, and is subject to change without notice. I don't recommend using it, especially if you want to do similar things in the future. | |
| Mar 23, 2023 at 19:42 | history | edited | gringer♦ | CC BY-SA 4.0 |
added 266 characters in body
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| Mar 23, 2023 at 18:33 | comment | added | M__♦ | I agree with @MaximilianPress given the approach used. The thing about Biopython is this already done - so it's easy | |
| Mar 23, 2023 at 16:21 | comment | added | Maximilian Press | Have you tried looking for ways to get alternative output formats from blast that would be easier to parse? | |
| Mar 23, 2023 at 14:42 | comment | added | CommunityBot | Please clarify your specific problem or provide additional details to highlight exactly what you need. As it's currently written, it's hard to tell exactly what you're asking. | |
| S Mar 23, 2023 at 14:12 | review | First questions | |||
| Mar 23, 2023 at 14:42 | |||||
| S Mar 23, 2023 at 14:12 | history | asked | user14714429 | CC BY-SA 4.0 |