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Jul 7, 2023 at 4:01 vote accept Arkajyoti Banerjee
Jul 6, 2023 at 21:56 comment added M__ Hi @ArkajyotiBanerjee upvotes and/or "accepted answers" are much more preferred to thanks: you can upvote. My advice is to open (a) separate question(s) for the remaining issues because this would clarify what is being sought. Multi-part questions are generally discouraged.
Jul 6, 2023 at 21:41 comment added Arkajyoti Banerjee Thanks. I read the paper. That answers the first part of my question. What about the last part? Also, among the various DE test methods in edgeR such as exactTest(), glmFit() and glmLRT(), glmQLFit() and glmQLFTest(), which is/are the one(s) most suitable for running DE tests on the other non-coding features?
Jul 5, 2023 at 15:21 history answered M__ CC BY-SA 4.0