Timeline for How to you find read statistics for bam files with terminal mismatch?
Current License: CC BY-SA 3.0
6 events
| when toggle format | what | by | license | comment | |
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| Feb 27, 2018 at 13:56 | comment | added | MAPK | Yes I tried using pileup package, but couldn't figure out how to get cigar string. | |
| Feb 27, 2018 at 13:54 | comment | added | Biomagician | Have you looked into using the R Bioconductor Rsamtools::scanBam function? It can import a BAM file into R and then you can easily get the CIGAR string and check the CIGAR string for mismatches? | |
| Feb 27, 2018 at 1:58 | history | edited | MAPK | CC BY-SA 3.0 |
added 787 characters in body
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| Feb 27, 2018 at 1:53 | answer | added | Karel Břinda | timeline score: 2 | |
| Feb 27, 2018 at 0:19 | review | First posts | |||
| Feb 27, 2018 at 13:54 | |||||
| Feb 27, 2018 at 0:19 | history | asked | MAPK | CC BY-SA 3.0 |