0
$\begingroup$

I was running CIBERSORT web and saw this error:

Exception in thread "Thread-0" java.lang.ArrayIndexOutOfBoundsException: 0
at launch.QN.doQN(QN.java:56)
at launch.Cibersort.Run_CIBERSORT(Cibersort.java:611)
at launch.Cibersort.run_all(Cibersort.java:179)
at launch.Cibersort$runCIBERSORT.run(Cibersort.java:1585)
at java.lang.Thread.run(Thread.java:745)
311

Does anyone know why?

$\endgroup$

1 Answer 1

0
$\begingroup$

OK I found the bug. CIBERSORT seems to require tsv files instead of csv files. Plus it doesn't seem to like empty columns

$\endgroup$

Your Answer

By clicking “Post Your Answer”, you agree to our terms of service and acknowledge that you have read and understand our privacy policy and code of conduct.

Not the answer you're looking for? Browse other questions tagged or ask your own question.