I was thinking about the best method for normalization, which takes gene length into account (in order to compare genes)...
Do you think I can do that? : - taking raw counts and dividing each gene by its length - using the function rlog (DESeq2) on these counts divided by gene length (I would modify the rlog function to allow it to be used on decimal data).
I was wondering if it would be ok to do that.
Thank you very much for your help