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I am trying to include a new tool to the galaxy main menu, following these instructions.
tool_conf.xml doesn't exists only tool_conf.xml.main and tool_conf.xml.sample and none of them seem to be working. I make changes and nothing happens when I run galaxy.

What am I missing?

Thank you.

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The .main and .sample file files usually come with default installations and may have been removed by whoever setup this Galaxy instance. You can look at the originals online and just base your own file on those: https://github.com/galaxyproject/galaxy/blob/dev/lib/galaxy/config/sample/tool_conf.xml.sample

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  • $\begingroup$ Thanks @Devon, I removed the suffix .sample and it worked. I believe that galaxy folks could improve/update their manual. $\endgroup$
    – aerijman
    Dec 3 '19 at 14:58

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