I am seeking a virological database comprising the following information:
Preferably hosting multiple strains/samples of a given virus samples of strain.
Any assistance would be welcome.
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Given "any virus will do", the viruses that are "head and shoulders" above the rest in terms of volumes of data are HIV and influenza.
The influenza database is here
The influenza viral spike that attaches to the cell receptor is the HA protein – hemagglutinin. The cell receptor is sialic acid – a small sugar that is attached to many different proteins on the cell surface. You can of course simply search PDB for HA or else Genbank.