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Hi I have seen similar questions but I still need clarification on

  1. Removing ribosomal RNA genes from a gene counts matrix (Drosophila Melanogaster)
  2. Finding a fasta file with only ribosomal genes, I downloaded a reference genome and annotations from ensembl but I don't think there is a matching rRNA reference.

http://uswest.ensembl.org/Drosophila_melanogaster/Info/Index

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  • $\begingroup$ Can you specify what kind of analysis you are doing? Are you using an annotation file? $\endgroup$ – Diango Oct 15 at 18:55

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