identify where is the starting point for the synthesis of a protein in the DNA
For indentify a starting point in RNA or DNA my function search all ATG or M in the sequece and report the linear position of start, than the function search TAA and TAG for stop codon and report the end position.
For the end codon what I have to search? only TAA and TAG or TGA and TGG too?
How is possible some protein begin with "F" as in "FFRE..." and not "M..." ?
Than it result more starting point solutions respect to protein found in GeoBank, what are the add restriction for limit that number?
Are there easy to search sequences that make sure that is a start of the protein code? as seems to me "AGG AGG" but is not clear where they should be in the array and not seems general seen proteins.
Can the synthesis of protein be affected by temperature? What other factors come into play?
Passing my function to DNA of one virus, the first test, the function identifies in the end of virus many little proteins of 2 3 4 5 10 protein letters. These little protein pieces are really sintetized? or there is a min lenght for sintetized proteins?