2
$\begingroup$

Is there a basic example anywhere that explains how to create a no-frills view config to view the contact map for a non-human genome assembly using the server-based viewer at http://higlass.io?

I believe I have a valid .mcool file for the contact map. But looking at the description of view config files it seems clear those are not created by hand. I haven't been able to find any place that describes how to create one.

Any help would be greatly appreciated.

Improve this question
$\endgroup$
1
  • $\begingroup$ I agree that it would seem nice to have one of these in an easily findable place. There is a minimal JSON in a repo that might be related but it's not at all clear that it's the same thing. But have you looked at the tutorial which seems to have information about getting a quick start on some data? Presumably you have also looked at the viewconf docs. $\endgroup$
    – Maximilian Press
    Apr 9, 2022 at 21:54

0

Reset to default

Your Answer

By clicking “Post Your Answer”, you agree to our terms of service and acknowledge that you have read and understand our privacy policy and code of conduct.

Browse other questions tagged or ask your own question.