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I am trying to do somatic mutation detection via the open source software, UNCeqR

I got following error was detected on mac z shell during installation.

BEGIN failed--compilation aborted at test.pl line 11.
not ok 1
make: *** [test_dynamic] Error 2
  CALLAHAN/Math-CDF-0.1.tar.gz
  /usr/bin/make test -- NOT OK
//hint// to see the cpan-testers results for installing this module, try:
  reports CALLAHAN/Math-CDF-0.1.tar.gz

I would like to ask for any advice to proceed.

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    $\begingroup$ Did you look at the cpan-testers results as suggested? Is this the entirety of the output? What command did you run? $\endgroup$ Jun 18, 2022 at 16:07
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    $\begingroup$ Please clarify your specific problem or provide additional details to highlight exactly what you need. As it's currently written, it's hard to tell exactly what you're asking. $\endgroup$
    – Community Bot
    Jun 18, 2022 at 18:46

1 Answer 1

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It is a Perl compilation error:

(Perl libraries) Math::CDF-0.1 -- Generate probabilities and quantiles from several statistical probability functions

conda install -c bioconda perl-math-cdf

cpan INSTALL Math::CDF

This module provides cumulative probabilities [P(X <= x)] and quantiles [given p, returns x such that P(X <= x) = p] from several statistical probability distributions.

This package provides a perl interface to DCDFLIB

https://metacpan.org/release/CALLAHAN/Math-CDF-0.1/source/README

make and make test of Perl libraries Math::CDF-0.1 in the installation are not okay

https://drive.google.com/file/d/1Bd8TklsUPMqDRDn7zImGEXI9Nk84vkfU/view?usp=sharing

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