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I am trying to run Tax4Fun in MicrobiomeAnalyst, but am running into trouble with my table formatting. From the qiime2 pathway, I have an OTU, metadata and taxonomic table formatted like so: feature table

metadata

taxonomic table

In order to use Tax4Fun, I understand that I will need to reformat my OTU table to include sequence IDs so it looks like this example: sample seq table

However, I cannot figure out how to merge my sequence files from the qiime2 pathway with the OTU table so it looks like that. Any suggestions would be much appreciated!

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  • $\begingroup$ Please clarify your specific problem or provide additional details to highlight exactly what you need. As it's currently written, it's hard to tell exactly what you're asking. $\endgroup$
    – Community Bot
    May 30 at 21:39

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