I have a genome annotation file for in gff file format for a certain lizard species, how would I go about analyzing a specific gene (sulf1) to see if it is functional, I wanted to specifically look at the promoter region. I want to specifically locate the transcription factor binding site.
The sulf1 gene is annotated within the gff file: Scaffold_9__2_contigs__length_103119859 maker gene 64733381 64791637 . + . ID=ANN20526;Note=Similar to SULF1: Extracellular sulfatase Sulf-1 (Coturnix coturnix OX%3D9091);