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I am working on a microarray analysis using Agilent data (SurePrint G3 Mouse GE 8x60K IDs e.g. A_30_P01020727), having the list of Probe IDs with it´s corresponding statistics and fold changes. My goal is obtain the corresponding RefSeqmRNA from NCBI to anotate them afterwards.

So far, I have tried different approaches combining several databases and internet searching tools without succes. I would like to know the best way to achieve this efficiently. I am open to using languages like R, and any suggestions on libraries or packages that can facilitate this process would be greatly appreciated.

Could you provide me with a guide or code examples to annotate Agilent identifiers and map them to RefSeqmRNA from NCBI?

Thank you in advance for your help.

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  • $\begingroup$ Please clarify your specific problem or provide additional details to highlight exactly what you need. As it's currently written, it's hard to tell exactly what you're asking. $\endgroup$
    – Community Bot
    Commented Jul 10 at 0:41

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