Which genes/transcripts show up as having the highest RPKM/FPKM on a human RNA-seq experiment? Is it usually the same genes/transcripts?
EDIT: mRNAs (e.g. poly-A RNA-seq preps) and not including small RNAs.
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As asked as it is, the answer is probably no.
Indeed, the highest expressed RPKM/FPKMs will be different from one condition (or tissue) to another one for example.
Then, you may also have technical artefacts due to the wet-lab part or to the normalisation. For example, mitochondrial genes are often reported in the top expressed genes.
Now, if you want to compare your results to an outside source, I recommend checking the EBI gene expression Atlas* and more specifically the Baseline expression experiments.
*Disclaimer: I am related to this project myself.