Is there a server/website somewhere where I can submit a list of DNA/RNA sequences and find the list of kmers hits and organisms where it's found? I checked the kraken website, but they don't have a webserver for it.
I am specifically looking for kmers, as a complement of just doing BLAST on the NCBI nt database or similar.
EDIT: So far I have seen:
- the Kraken app on Illumina BaseSpace, but it's not trivial to upload FASTQ data that hasn't been produced from an Illumina instrument.
- the CLARK trio of apps in InsideDNA, tried once with default parameters but produced empty results.