I am having
RNA-seq data set for
C.Elegans. I do not know which annotation scientists used for naming the genes of it, but I need to search somehow for the
^mt- genes like specified in the tutorial:
If I just implement
grepl search for the
character array of gene names that I have, I am always getting all values
FALSE as if there are no
spike-ins and mitochindrial genes.
Any suggestion would be greatly appreciated.
Sample gene name from the dataset: