I want to compare the results from functional enrichment (e.g GO term enrichment generated by gProfileR) between two gene lists. The idea is to see if these gene lists are enriched in the same terms or if they have specific terms.
This is easy to do at a glance when you have few terms but when the number of terms increases and due to redundancies in GO term annotation a manual comparison becomes unreliable.
So the questions is: Is there a tool for comparing the results from functional enrichment between different gene lists?