Questions tagged [anaconda]
Power all inclusive package used in data science for managing Python and its dependencies
5
questions
4
votes
1
answer
111
views
Kallisto error: index input file could not be opened!
I am utilizing Kallisto in Anaconda/miniconda for RNA sequencing. I have successfully made ...
1
vote
2
answers
65
views
Bioconductor Conda release delay
How long does it take for the latest Bioconductor to end up on Conda? I think I saw a blog post about the challenges with this process, but I cannot find it. For example, Bioconductor 3.13 was ...
2
votes
1
answer
94
views
cmapPy exception
I'm trying to read gctx files with cmapPy. This is my code:
...
0
votes
1
answer
175
views
UCSC packages/tools ucsc-netchainsubset and ucsc-fatotwobit not working on GNU/Linux
I have installed some ucsc tools on my Mac computer and it worked fine:
Installation
...
3
votes
1
answer
142
views
Why can I not install snakemake on my SLURM computer even though I can find it in the bioconda channel?
I searched for the package 'snakemake' on my SLURM cluster using:
conda search --channel bioconda snakemake
and I get many versions, up to 5.4.2.
I then try to ...