As of May 31, 2023, we have updated our Code of Conduct.

Questions tagged [bacteria]

One of the three domains of life, with Archaea and eukaryotes. Bacteria, along with Archaea, are prokaryotes, i.e. lack a nucleus.

Filter by
Sorted by
Tagged with
3 votes
1 answer
78 views

Barrnap Bacterial rRNA Predictor script permission denied error when running Prokka

I am trying to run the Prokka annotation tool on my linux machine and have installed Barrnap and added it to $PATH and given the folder chmod 777 permission. However, when running Prokka, it gives the ...
Harish Prabhakar's user avatar
1 vote
2 answers
1k views

Extract reads from bam files by their @RG

How could I extract reads from bam files by their read groups @RG ?, I've got one file containing all reads for 5 samples, the SM is appears NONE, So, I want to extract each sample reads by the @RG ...
Maloki's user avatar
  • 11