Questions tagged [canu]

The long-read genome assembler suitable for long reads having a relatively high error rate, such as PacBio and Nanopore data.

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How can I improve a long-read assembly with a repetitive genome?

I'm currently trying to assembly a genome from a rodent parasite, Nippostrongylus brasiliensis. This genome does have an existing reference genome, but it is highly fragmented. Here are some ...