Questions tagged [cibersort]

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how to use CIBERSORT

I have seen in several articles, the use of CIBERSORT to calculate the proportion of immune system cells using gene expression data, I would like to try it but I have not found how to install it for R,...
María José's user avatar
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how to install cibersort in R, to do deconvolution using my RNA-seq Data with public single cell data

I have RNA-seq Data from lung cancer immunotherapy patients but i don't have any single cell data from my sample, so i wanted to do a deconvolution with a public single cell data. I thought of doing ...
Rita Soares's user avatar
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1 answer
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CIBERSORT runtime error eval failed

I was running CIBERSORT but caught this error right after it started permutation: ...
Code42's user avatar
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1 answer
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CIBERSORT runtime error

I was running CIBERSORT web and saw this error: ...
Code42's user avatar
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