Questions tagged [cibersort]
The cibersort tag has no usage guidance.
4
questions
0
votes
0
answers
50
views
how to use CIBERSORT
I have seen in several articles, the use of CIBERSORT to calculate the proportion of immune system cells using gene expression data, I would like to try it but I have not found how to install it for R,...
3
votes
0
answers
43
views
how to install cibersort in R, to do deconvolution using my RNA-seq Data with public single cell data
I have RNA-seq Data from lung cancer immunotherapy patients but i don't have any single cell data from my sample, so i wanted to do a deconvolution with a public single cell data. I thought of doing ...
0
votes
1
answer
346
views
CIBERSORT runtime error eval failed
I was running CIBERSORT but caught this error right after it started permutation:
...
0
votes
1
answer
144
views
CIBERSORT runtime error
I was running CIBERSORT web and saw this error:
...