Questions tagged [circos]

The tag has no usage guidance.

5 questions with no upvoted or accepted answers
Filter by
Sorted by
Tagged with
2 votes
0 answers
112 views

How to make CIRCOS plot of VCF file?

I have 3 VCF files, I want to make CIRCOS plot just like the following: https://www.nature.com/articles/s41598-020-70527-8/figures/4 I try to follow the tutorial but could not understand. The genome ...
user avatar
  • 75
2 votes
0 answers
85 views

Circos plot with mutation data

This was my earlier question but now I would like to see patient sample mutation which i have tried and im getting an output but it looks really dumb So here are my data files and conf file files ...
user avatar
  • 1,640
2 votes
0 answers
54 views

Cicros plot issue using two data track

Im trying to plot log fold change for a condition as well as no of patient for a particular gene mutated information but whenever im trying to do that i see only only the fold changes labeling not the ...
user avatar
  • 1,640
1 vote
0 answers
261 views

Circos plot with circlize

This is the post where they made circos using R I'm just following that the part answered by Zuguang Gu, not not sure what I'm doing wrong my file, and the code: ...
user avatar
  • 1,640
1 vote
2 answers
101 views

Chromosome information for miRNA

Apologies if this question is previously asked. I have a BAM file alignment to hg19 and miRNA gff3 file from ...
user avatar