Questions tagged [clusterprofiler]

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18 views

How to detail the specific GO terms

How can I get more specific GO terms when using clusterProfiler? I got my Dotplot by: ...
2
votes
1answer
56 views

What does the setSize ordering mean?

I am running gseGO function from clusterProfiler and getting an output where terms are ordered by the ...
2
votes
1answer
1k views

clusterProfiler, groupGO: meaning of GeneRatio

I am running groupGO function from clusterProfiler: ...
1
vote
1answer
125 views

groupGO parameters explanation (ont and level)

I need to use groupGO in clusterProfiler to find functional profile of a list of genes, and I am having trouble finding out what ...