Questions tagged [cytoscape]

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How to activate an installed plugin (NetworkAnalyzer) on Cytoscape?

I need to use NetworkAnalyzer to analyse the nodes of a PPI network on Cytoscape, but the pre-installed app is not displayed on the Tools menu. I checked the App Manager, but it shows "Installed&...
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co-occurrence analysis and visualization for amplicon microbial data

I am trying to learn co-occurrence analysis for microbial data. I got relative abundance at the genera level for 50 genera in 19 samples. I understand that for network analysis first I need to do ...