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Questions tagged [figure-explanation]

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1answer
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What does that mean if there is no bifurcations in my time series single cell data?

I have analysed my time series single cell data with Scuba algorithm but that says that there is no bifurcations in my data and outputted a single chain of 4 states with no branching like below figure:...
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1answer
25 views

How do I interpret my phylogenetic tree construction from Glucosidases in the Actinobacteria class?

Dear knowledgeable bioinformaticians, I'm currently pursuing an undergraduate degree and as a result I do not have so much knowledge in this topic. I'm having some troubles understanding my ...
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0answers
92 views

Program to make a haplotype network for a specific gene

Currently my lab manually uses pop art to make the network after using PHASE to id an individual's alleles. Example: I just feel like there's got to be a better, more time effective way to do this.
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2answers
39 views

Correlation network representation

I have troubles understanding the figure 10 of this paper: Similarity network of participating methods for BPO. Similarities are computed as Pearson’s correlation coefficient between methods, ...
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1answer
37 views

About CAFA experiment

I have a question about CAFA1 and CAFA2 experiment. CAFA is an experiment that compare computational methods predicting protein functions. In the paper discussing CAFA2, there is an image comparing ...