Questions tagged [galaxy]

A framework for doing bioinformatics in a GUI, on the cloud. Free.

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Where is the galaxy results file path?

I want to wrap galaxy into a docker image, and I want to delete files that are older than a certain date on a regular basis, so I want to know how to generate the files and where to store them.
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In Galaxy, using the bracken tool, how do I get a Kmer distribution?

As you can see in the image, the Kmer distribution field is empty: "No options available" What am I missing? Is there another tool I must use first to generate a Kmer distribution?
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FastQC and Trimmomatic in Galaxy?

I am independently working on data retrieved SRA database, paired-end data as separate inputs. The proceedure I followed is, After running FastQC using Galaxy, the majority of the modules have failed....
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Do you need galaxy.yml when you start creating galaxy?

First question: I found that there is no galaxy.yml in the config directory of the running version of docker galaxy, only galaxy.yml.sample file and galaxy.yml.interactivatetools file, so do I need to ...
huangzj's user avatar
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