Questions tagged [genome-browser]

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Command line based interaction with the UCSC genome browser, automated data upload and track generation

Is there a way to submit data to ucsc genome browser for result/track display, on the fly, as a local bedgraph file with example contents like below: ...
Zebra Fish's user avatar
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How come bigWigSummary shows coverage greater than 1 for some region of the genome?

I am running this command, using the UCSC utilities: bigWigSummary -type=coverage ./ chr4 25526708 25528708 1 to get phastCons77way ...
VeritatemAmo's user avatar