Questions tagged [multithreading]
The multithreading tag has no usage guidance.
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Trying to download a large number of files from ENA programmatically
I am downloading a large number of files from the ENA in Python using Multithreading. As an example, to be more concrete, I tried downloading 12 files simultaneously using 12 threads. I noticed that ...
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Chunk alignment in a name sorted bam for parallel processing
I have a bam file with 1 billion alignment reads of which there are 700 million unique reads. I want to split the alignments into chunks for parallel-processing. Multi-alignments of the same read ...
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Multithread fastq processing with kseq.h in C++11?
Background
I am using the wonderful kseq.h as my fastq/fasta parser for a C++ project. My actual implementation uses something like this, where I am counting kmers ...
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