Questions tagged [nextflow]

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Merge multiple channels each emits multiple files in nextflow

I need to merge multiple channels each emits multiple file. So far I did something as below: ...
1
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1answer
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Nextflow: ordering the execution of processes; outputs of process A are inputs of process B

I need to build a pipeline where 2nd process starts after completion of the 1st process and the 3rd after 2nd. As I understand nextflow's processes run parallel. But I need it to run in a order 1st>...
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parse csv/text file to create a channel with array in nextflow

[![example csv file][1]][1] First I want to start by parsing and doing some operation on a text/csv file. How could I read a csv/text file in nextflow? Suppose, I have above csv file with 3 columns. ...