Questions tagged [pytorch]

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Reproducible PyTorch Model

I'm using PyTorch (1.7.1), PyTorch Geometric (1.6.3), NVIDIA Cuda (11.2). I need to make a neural network reproducible for a competition. However, when I try: ...
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What datasets are available out there for prediction based on DNA sequences? [closed]

I am looking for publicly available data for a genomics deep learning project. My goal is to compare different architectures to predict biological insights from DNA sequences. I have heard about ...
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How to predict with the pre-trained DNABERT model?

I was curious to give DNA BERT a try. This is a BERT (Bidirectional Encoder Representations from Transformers) model that was trained on short (k=3,4,5, or 6) k-...
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Metapath2vec on Drug-ADR Heterogeneous Graph

I am new in this field and I am having some problems regarding a new project. I built a graph using Drugbank Data connected to SIDER Adverse Reactions. I used Organ- level Terms to classify the ADRs ...
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