Questions tagged [scaffold]

A set of contigs, the order of which corresponds to consecutive genomic locations. Contigs can be scaffolded using a reference genome or optical mapping.

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Phylogenetic tree building from proGenomes database for shotgun metagenomics

For some weeks I'm fighting with an issue about phylogenetic tree building to use in a phyloseq object in order to calculate beta-diversity metrics that takes into account phylogenetic distance. I’m ...
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