Questions tagged [scrnaseq]

Use this tag for questions related to single-cell RNA-seq.

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validating identified sub-populations of cells in scRNA-seq

In the analyses of single-cell RNA-seq data there are different unsupervised approaches to identify putative subpopulations (e.g. as available with Suerat or SCDE packages). Is there a good way of ...
7
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Pseudo-temporal ordering in heterogeneous populations

What's the most widely accepted tool for doing pseudo-temporal ordering from scRNAseq data? Also is there away to separate differential expression that occurs based on "cell identity" or maybe more ...

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