Questions tagged [trna]
The trna tag has no usage guidance.
4
questions
1
vote
2
answers
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views
tRNAdb insertion symbols. To what they correspond?
I have to manually curate some tRNA sequences in order to have their original sequence without modifications. I am getting these sequences from tRNAdb. In these sequences, I found often "_" ...
- 97
3
votes
4
answers
121
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Pipeline to analyse small RNAseq and tRNAs?
I am a newbie in this world (just finished my master's on bioinformatics. As a practice, a researcher gave me 4 fastq files from a small RNAseq experiment, to see if I am able to reproduce their ...
- 31
2
votes
0
answers
52
views
What is tRNAscan-SE bit score?
I have used the command-line version of tRNAscan-SE by Lowe et al. (1997) on the reference genome sequence of C. elegans to predict tRNAs. The programme outputs a table with tRNA locations, amino acid,...
- 2,319
5
votes
4
answers
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tRNAscan-SE error: FATAL: Unable to find /usr/local/bin/cmsearch executable
I have downloaded tRNAscan-SE from here. After decompressing and untaring the file, I installed it using:
./configure
make
make install
When I type ...
- 2,319