Questions tagged [trnascan-se]
The trnascan-se tag has no usage guidance.
3
questions
1
vote
2
answers
179
views
convert tRNA coordinates Result to Fasta format
I believe many of the experts here have gone through this issue,
I have run tRNAscan-SE on my genome to predict all the tRNAs, and have successfully gotten all the tRNA coordinates like start, end ...
- 364
2
votes
0
answers
67
views
What is tRNAscan-SE bit score?
I have used the command-line version of tRNAscan-SE by Lowe et al. (1997) on the reference genome sequence of C. elegans to predict tRNAs. The programme outputs a table with tRNA locations, amino acid,...
- 2,439
5
votes
4
answers
2k
views
tRNAscan-SE error: FATAL: Unable to find /usr/local/bin/cmsearch executable
I have downloaded tRNAscan-SE from here. After decompressing and untaring the file, I installed it using:
./configure
make
make install
When I type ...
- 2,439