Questions tagged [unsupervised-learning]

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What visualization was used for ICA in the tissue experiment?

I want to run the experiments in mentioned in enter the matrix. For the the plot in figure 3B it mentioned that The relative absolute value of the magnitude of each element in the pattern matrix ...
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What codes represent what genes?

I want to run experiments on the data used in PatternMarkers & GWCoGAPS for novel data-driven biomarkers via whole transcriptome NMF link So far, the paper has reduced the dimension to ammon's ...
  • 487
2 votes
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What data set was used Gene Expression Data of Postmortem Tissues?

I want to run the experiments "Sample Application to Genotype-Tissue Expression (GTEx) Project Gene Expression Data of Postmortem Tissues" mentioned in "Enter the Matrix: Factorization ...
  • 487
2 votes
1 answer
63 views

Extracting clusters, hierarchical clustering - bulk RNASeq

I have been attempting to extract particular clusters, given by hierarchical clustering outputs from the pheatmap function (in R). Please find the ...
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