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MTG
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ProteinPromt installation

i dont know how to build/pull this container (https://codebase.helmholtz.cloud/proteinprompt/ProteinPrompt) can you advice me how to install it?

EDIT:

My soft - Ubuntu 20.04 lts

Thanks to @M__ I manage to build image (almost). But I have an issue :

roboczy@marcin-B550-AORUS-ELITE-AX-V2:/home/marcin/ProteinPrompt$ docker build -t dockerfile .
[+] Building 1.0s (15/15) FINISHED                                              
 => [internal] load build definition from Dockerfile                       0.0s
 => => transferring dockerfile: 1.19kB                                     0.0s
 => [internal] load .dockerignore                                          0.0s
 => => transferring context: 2B                                            0.0s
 => [internal] load metadata for docker.io/continuumio/miniconda3:4.10.3-  0.9s
 => [ 1/10] FROM docker.io/continuumio/miniconda3:4.10.3-alpine@sha256:e0  0.0s
 => [internal] load build context                                          0.0s
 => => transferring context: 650B                                          0.0s
 => CACHED [ 2/10] RUN rm /bin/sh && ln -s /bin/bash /bin/sh               0.0s
 => CACHED [ 3/10] RUN conda update -n base conda                          0.0s
 => CACHED [ 4/10] COPY ./data/proteinPrompt.yml /                         0.0s
 => CACHED [ 5/10] RUN conda env update --name root -f /proteinPrompt.yml  0.0s
 => CACHED [ 6/10] RUN mkdir /proteinPrompt/                               0.0s
 => CACHED [ 7/10] COPY ./proteinPrompt/*py /proteinPrompt/                0.0s
 => CACHED [ 8/10] RUN mkdir /model/                                       0.0s
 => CACHED [ 9/10] RUN wget https://zenodo.org/record/5708224/files/rf_hu  0.0s
 => CACHED [10/10] COPY ./data/all.proteins.HUMAN.autocorrelation.pbz2 /m  0.0s
 => exporting to image                                                     0.0s
 => => exporting layers                                                    0.0s
 => => writing image sha256:ae93ff408fb6468280a5f0344bb2ac5ac811df2e5d32a  0.0s
 => => naming to docker.io/library/dockerfile                              0.0s
WARNING: buildx: failed to read current commit information with git rev-parse --is-inside-work-tree

and image is named 'dockerfile'? and it do not work

roboczy@marcin-B550-AORUS-ELITE-AX-V2:/home/marcin/ProteinPrompt$ docker images
REPOSITORY    TAG           IMAGE ID       CREATED          SIZE
dockerfile    latest        ae93ff408fb6   11 minutes ago   2.02GB
alphafold     latest        c41a4b5e9d48   13 days ago      10GB
nvidia/cuda   11.0.3-base   4f3e95122fab   23 months ago    122MB

roboczy@marcin-B550-AORUS-ELITE-AX-V2:/home/marcin/ProteinPrompt$ docker run  -v $(pwd)/data:/data proteinprompt search -f data/input.fa -o data/output.csv
Unable to find image 'proteinprompt:latest' locally
docker: Error response from daemon: pull access denied for proteinprompt, repository does not exist or may require 'docker login': denied: requested access to the resource is denied.
See 'docker run --help'.
MTG
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