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Results tagged with kallisto
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user 10409
Use this tag to refer to the questions related to kallisto
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Kallisto psudoaligner quant not giving me expected output
I am trying to run this kallisto (latest) quant and all I get are abundance and json files.
kallisto quant --plaintext -t 4 -o rf-stranded.nob.1K1_L7.0 -i mm9_ref.idx --rf-stranded 1K1_L7.0 2K1_L7.0 … ,
"n_unique": 3641646,
"p_pseudoaligned": 19.6,
"p_unique": 15.9,
"kallisto_version": "0.46.1",
"index_version": 10,
"start_time": "",
"call": "kallisto …