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use for questions regarding plotting and representation of data, combine with tags specific to type of analyses (genome, protein, rna-seq) and language or library (python, R, ggplot2, igv) if applicable. You are welcome to upload a sketch or a scheme of desired outcome.

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Visualization of mutations in (part of) viral genome - existing tools?

I ended up using lolliplots from the trackViewer R package; it can do VCF-based visualization and is flexible enough I can feed it data from other sources (I wound up parsing Nextclade mutation calls for …
KeyboardCat's user avatar
2 votes
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Visualization of mutations in (part of) viral genome - existing tools?

The ready-made tools I've found for visualization of mutations so far were specifically tailored to human sequences and/or for visualizing aggregated data for multiple genomes, or were web tools, which …
KeyboardCat's user avatar