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Generic Feature Format version 3, a common tab-delimited plain-text format for annotating genes and other genomic features.

1 vote
1 answer
200 views

How to extract sequences of a specific gene from genomes, with genomes' .fna, .gff and resul...

I am trying to do alignment among orthologs and paralogs of a gene but I encountered some problems. I have came up with a workflow, but the sequences I extracted are not correct. They are of hugely va …
Lily Li's user avatar
  • 23
1 vote
0 answers
26 views

Extracting animo acid and nucleotide sequences from KofamScan output and codon alignment

I want to extract the amino acid sequences from KofamScan output, and my workflow is as attached in the picture: For the analysis I am doing, I need to get the animo acid sequences, align them, and do …
Lily Li's user avatar
  • 23