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Convert genotyping results to vcf or other plink formats
Genotyping software called T1K to generate KIR genotyping, the output file contains genes and alleles for each sample, how can i convert the results to a vcf file or other formats which can be used in plink … _2
KIR2DL1 KIR2DL1*004 KIR2DL1*042
KIR2DL4 KIR2DL4*005 KIR2DL4*005
KIR3DL1 KIR3DL1*005 KIR3DL1*005
KIR3DP1 KIR3DP1*006 KIR3DP1*010
My thought is to first convert the above file to a vcf file and use plink …