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Results tagged with sequence-annotation
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user 8543
The process of attaching contextual information to a biomolecular (DNA, RNA, or protein) sequence, such as the location of genes, promoters, or repeats in genomic DNA, or the function of a protein.
2
votes
1
answer
508
views
annotation using ChIPseeker package error
I have differential binding sites object obtain from diffBind (dba.report). I am using the ChIP Seeker package to annotate the peaks but keep getting the following error: Error in (function (classes, …
- 125
2
votes
annotation using ChIPseeker package error
that was solved by changing seq level:
newnames <- paste0(c("1","2","3","4", "5","6","7", "8","9","10","11","12","13","14","15","16","17","18","19","20","21","22","X","Y","MT"))
names(newnames) <- pas …
- 125
0
votes
3
answers
211
views
differential analysis of chip-seq data
I have several sets of chip-seq data. I called the peaks using Macs2. I am pretty new to the field and I will appreciate any help. I wanted to annotate the peaks and see which peaks are shared between …
- 125