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Please supplement your question with a minimal reproducible example. Use dput() for data and specify all non-base packages with library calls. For statistical questions please use http://stats.stackexchange.com.

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Grouping a set of genes in a ggplot object

If you had the classification into oncogene/TSG for each gene in a column (let's call it gene_class) in lmuts, you could split both groups into facets within the plot by adding: + facet_wrap(~gene_cl …
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