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Nucleotide base changes in the genome from its parental copy which for eukaryotes or bacteria is DNA

1 vote

How to calculate mutation rate and mutation sites in a genome using FASTA file?

You can still align a FASTA file with a tool like bwa mem ( if they are short reads ) or minimap2 for long reads and run it through a variant caller like freebayes. Alternatively, if you have sufficie …
Nicholas Heyer's user avatar