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2 votes

How do I lift GWAS results to hg38?

I would advise against using dbSNP rsIDs to perform a liftover as they get updated over time. … I recently wrote a software to liftover summary statistics and the documentation includes instructions that show you how to easily generate educational attainment summary statistics for GRCh38 …
Giulio Genovese's user avatar
0 votes

Lifting snp rsid build 37 to 38

They are +munge to convert summary statistics into files following the GWAS-VCF specification and +liftover to convert a VCF from one genome build to another. …
Giulio Genovese's user avatar